Elnaz Fazeli profile picture
Elnaz
Fazeli
Doctoral Student, Institute of Biomedicine
MSc

Contact

Areas of expertise

Microscopy
Fluorescence
Image analysis

Biography

PhD student working on osteoclast cytoskeleton characterization. Focusing on microscopy techniques and image analysis.

Teacher tutor, and teaching master's degree students in Biomedical Sciences, Biomedical Imaging track.


Teaching

I have been teaching Fluorescence in Bioanalytical Research, Bioimage Informatics, Hand-on Advanced Microscopy courses.

Research

Using imaging tools to study osteoclast cytoskeleton during fusion and transcytosis events.

Developing biophysical tools to enable high- and super-resolution imaging of resorbing osteoclasts.

Publications

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QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy (2021)

Glyn Nelson, Ulrike Boehm, Steve Bagley, Peter Bajcsy, Johanna Bischof, Claire M Brown, Aurelien Dauphin, Ian M Dobbie, John E Eriksson, Orestis Faklaris, Julia Fernandez-Rodriguez, Alexia Ferrand, Laurent Gelman, Ali Gheisari, Hella Hartmann, Christian Kukat, Alex Laude, Miso Mitkovski, Sebastian Munck, Alison J North, Tobias M Rasse, Ute Resch-Genger, Lucas C Schuetz, Arne Seitz, Caterina Strambio-De-Castillia, Jason R Swedlow, Ioannis Alexopoulos, Karin Aumayr, Sergiy Avilov, Gert-Jan Bakker, Rodrigo R Bammann, Andrea Bassi, Hannes Beckert, Sebastian Beer, Yury Belyaev, Jakob Bierwagen, Konstantin A Birngruber, Manel Bosch, Juergen Breitlow, Lisa A Cameron, Joe Chalfoun, James J Chambers, Chieh-Li Chen, Eduardo Conde-Sousa, Alexander D Corbett, Fabrice P Cordelieres, Elaine Del Nery, Ralf Dietzel, Frank Eismann, Elnaz Fazeli, Andreas Felscher, Hans Fried, Nathalie Gaudreault, Wah Ing Goh, Thomas Guilbert, Roland Hadleigh, Peter Hemmerich, Gerhard A Holst, Michelle S Itano, Claudia B Jaffe, Helena K Jambor, Stuart C Jarvis, Antje Keppler, David Kirchenbuechler, Marcel Kirchner, Norio Kobayashi, Gabriel Krens, Susanne Kunis, Judith Lacoste, Marco Marcello, Gabriel G Martins, Daniel J Metcalf, Claire A Mitchell, Joshua Moore, Tobias Mueller, Michael S Nelson, Stephen Ogg, Shuichi Onami, Alexandra L Palmer, Perrine Paul-Gilloteaux, Jaime A Pimentel, Laure Plantard, Santosh Podder, Elton Rexhepaj, Michael Royeck, Arnaud Royon, Markku A Saari, Damien Schapman, Vincent Schoonderwoert, Britta Schroth-Diez, Stanley Schwartz, Michael Shaw, Martin Spitaler, Martin T Stoeckl, Damir Sudar, Jeremie Teillon, Stefan Terjung, Roland Thuenauer, Christian D Wilms, Graham D Wright, Roland Nitschke
(Muu (O2))

Miniaturized Fluorescence Microscope for biological research in space (2021)

IAF Microgravity Sciences and Processes Symposium, Proceedings of the International Astronautical Congress
Tiensuu Kiira, Lehti Jussi, Saari Jouni, Säntti Tero, Virtanen Pasi, Hirvonen Mika, Pitkänen Lauri, Tcarenkova Elena, Fazeli Elnaz, Hänninen Pekka, van Loon Jack J.W.A., Gaubert François
(Vertaisarvioitu artikkeli konferenssijulkaisussa (A4))

QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy (2021)

Journal of Microscopy
Nelson Glyn, Boehm Ulrike, Bagley Steve, Bajcsy Peter, Bischof Johanna, Brown Claire M., Dauphin Aurélien, Dobbie Ian M., Eriksson John E., Faklaris Orestis, Fernandez-Rodriguez Julia, Ferrand Alexia, Gelman Laurent, Gheisari Ali, Hartmann Hella, Kukat Christian, Laude Alex, Mitkovski Miso, Munck Sebastian, North Alison J., Rasse Tobias M., Resch-Genger Ute, Schuetz Lucas C., Seitz Arne, Strambio-De-Castillia Caterina, Swedlow Jason R., Alexopoulos Ioannis, Aumayr Karin, Avilov Sergiy, Bakker Gert-Jan, Bammann Rodrigo R., Bassi Andrea, Beckert Hannes, Beer Sebastian, Belyaev Yury, Bierwagen Jakob, Birngruber Konstantin A., Bosch Manel, Breitlow Juergen, Cameron Lisa A., Chalfoun Joe, Chambers James J., Chen Chieh-Li, Conde-Sousa Eduardo, Corbett Alexander D., Cordelieres Fabrice P., Del Nery Elaine, Dietzel Ralf, Eismann Frank, Fazeli Elnaz, Felscher Andreas, Fried Hans, Gaudreault Nathalie, Goh Wah Ing, Guilbert Thomas, Hadleigh Roland, Hemmerich Peter, Holst Gerhard A., Itano Michelle S., Jaffe Claudia B., Jambor Helena K., Jarvis Stuart C., Keppler Antje, Kirchenbuechler David, Kirchner Marcel, Kobayashi Norio, Krens Gabriel, Kunis Susanne, Lacoste Judith, Marcello Marco, Martins Gabriel G., Metcalf Daniel J., Mitchell Claire A., Moore Joshua, Mueller Tobias, Nelson Michael S., Ogg Stephen, Onami Shuichi, Palmer Alexandra L., Paul-Gilloteaux Perrine, Pimentel Jaime A., Plantard Laure, Podder Santosh, Rexhepaj Elton, Royon Arnaud, Saari Markku A., Schapman Damien, Schoonderwoert Vincent, Schroth-Diez Britta, Schwartz Stanley, Shaw Michael, Spitaler Martin, Stoeckl Martin T., Sudar Damir, Teillon Jeremie, Terjung Stefan, Thuenauer Roland, Wilms Christian D., Wright Graham D., Nitschke Roland
(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))

Automated cell tracking using StarDist and TrackMate (2020)

F1000Research
Fazeli E, Roy NH, Follain G, Laine RF, von Chamier L, Hänninen PE, Eriksson JE, Tinevez J, Jacquemet G
(Vertaisarvioitu alkuperäisartikkeli tai data-artikkeli tieteellisessä aikakauslehdessä (A1))