All Publications of Biochemistry Unit

What does it take to be a collagen receptor? (2023)

Matrix Biology

Farndale Richard, Sonnenberg Arnoud, DiPersio C Michael, Eble Johannes A, Heino Jyrki, Gullberg Donald

(Article or data-article in scientific journal (B1))

Benchmarking blood collection tubes and processing intervals for extracellular vesicle performance metrics (2023)

Journal of Extracellular Vesicles

Dhondt B, Pinheiro C, Geeurickx E, Tulkens J, Vergauwen G, van der Pol E, Nieuwland R, Decock A, Miinalainen I, Rappu P, Schroth G, Kuersten S, Vandesompele J, Mestdagh P, Lumen N, De Wever O, Hendrix A

(Refereed journal article or data article (A1))

Bakteerien avulla antibiootteja mikrobi- ja syöpälääkkeiksi (2023)

Duodecim

Metsä-Ketelä Mikko, Siitonen Vilja, Artukka Erika

(Refereed review article in scientific journal (A2))

Inhibition of TGF-β signaling, invasion, and growth of cutaneous squamous cell carcinoma by PLX8394 (2023)

Oncogene

Siljamäki Elina, Riihilä Pilvi, Suwal Ujjwal, Nissinen Liisa, Rappu Pekka, Kallajoki Markku, Kähäri Veli-Matti, Heino Jyrki

(Refereed journal article or data article (A1))

Use of big data from health insurance for assessment of cardiovascular outcomes (2023)

Frontiers in Artificial Intelligence

Krefting Johannes, Sen Partho, David-Rus Diana, Güldener Ulrich, Hawe Johann S, Cassese Salvatore, von Scheidt Moritz, Schunkert Heribert

(Refereed review article in scientific journal (A2))

Engineering BioBricks for Deoxysugar Biosynthesis and Generation of New Tetracenomycins (2023)

ACS Omega

Tirkkonen Heli, Brown Katelyn V, Niemczura Magdalena, Faudemer Zélie, Brown Cortney, Ponomareva Larissa V , Helmy Yorsta A, Thorson Jon S, Nybo S Eric, Metsä-Ketelä Mikko, Shaaban Khaled A

(Refereed journal article or data article (A1))

Biocontrol of Fusarium graminearum, a Causal Agent of Fusarium Head Blight of Wheat, and Deoxynivalenol Accumulation: From In Vitro to In Planta (2022)

Toxins

Abbas Asmaa, Yli-Mattila Tapani

(Refereed journal article or data article (A1))

Pre-steady-state kinetics and solvent isotope effects support the "billiard-type" transport mechanism in Na+-translocating pyrophosphatase (2022)

Protein Science

Malinen Anssi M, Anashkin Viktor A, Orlov Victor N, Bogachev Alexander V, Lahti Reijo, Baykov Alexander A

(Refereed journal article or data article (A1))

Pilus PilA of the naturally competent HACEK group pathogen Aggregatibacter actinomycetemcomitans stimulates human leukocytes and interacts with both DNA and proinflammatory cytokines (2022)

Microbial Pathogenesis

Vahvelainen Nelli, Bozkurt Esra, Maula Terhi, Johansson Anders, Pöllänen Marja T, Ihalin Riikka

(Refereed journal article or data article (A1))

Quantitative parameters of bacterial RNA polymerase open-complex formation, stabilization and disruption on a consensus promoter (2022)

Nucleic Acids Research

Bera Subhas C, America Pim PB, Maatsola Santeri, Seifert Mona, Ostrofet Eugeniu, Cnossen Jelmer, Spermann Monika, Papini Flávia S, Depken Martin, Malinen Anssi M, Dulin David

(Refereed journal article or data article (A1))

Anthracyclines: biosynthesis, engineering and clinical applications (2022)

Natural Product Reports

Hulst Mandy B., Grocholski Thadee, Neefjes Jacques J.C., van Wezel Gilles P., Metsä-Ketelä Mikko

(Refereed review article in scientific journal (A2))

Prevalence of Hoarseness in Primary Health Care and Hospitals-Associations With Different Work Tasks and Environmental Factors Among Nurses (2022)

Journal of Voice

Vilén Liisa, Atosuo Janne, Putus Tuula

(Refereed journal article or data article (A1))

Single-step noncompetitive immunocomplex immunoassay for rapid aflatoxin detection (2022)

Food Chemistry

Peltomaa Riikka, Abbas Asmaa, Yli-Mattila Tapani, Lamminmäki Urpo

(Refereed journal article or data article (A1))

Molecular Variation and Phylogeny within Fusarium avenaceum and Related Species (2022)

Diversity

Yli-Mattila Tapani, Abbas Asmaa, Gavrilova Olga, Gagkaeva Tatiana

(Refereed journal article or data article (A1))

Comparison of biomass and deoxynivalenol production of northern European and southern European Fusarium graminearum isolates in the infection of wheat and oat grains (2022)

Journal of Plant Pathology

Yli-Mattila Tapani, Hussien Taha, Abbas Asmaa

(Refereed journal article or data article (A1))

A BioBricks Metabolic Engineering Platform for the Biosynthesis of Anthracyclinones in <i>Streptomyces coelicolor</i> (2022)

ACS Synthetic Biology

Wang Rongbin, Nguyen Jennifer, Hecht Jacob, Schwartz Nora, Brown Katelyn V, Ponomareva Larissa V, Niemczura Magdalena, van Dissel Dino, van Wezel Gilles P, Thorson Jon S, Metsä-Ketelä Mikko, Shaaban Khaled A, Nybo S Eric

(Refereed journal article or data article (A1))

Real-Time Single-Molecule Studies of RNA Polymerase–Promoter Open Complex Formation Reveal Substantial Heterogeneity Along the Promoter-Opening Pathway (2022)

Journal of Molecular Biology

Malinen Anssi M., Bakermans Jacob, Aalto-Setälä Emil, Blessing Martin, Bauer David L.V., Parilova Olena, Belogurov Georgiy A., Dulin David, Kapanidis Achillefs N.

(Refereed journal article or data article (A1))

Ethnomedicinal landscape: distribution of used medicinal plant species in Nepal (2022)

Journal of Ethnobiology and Ethnomedicine

Kunwar Ripu M., Baral Bikash, Luintel Sanjeev, Uprety Yadav, Poudel Ram C., Adhikari Binaya, Adhikari Yagya P., Subedi Suresh C., Subedi Chandra K., Poudel Prakash, Paudel Hem R., Paudel Basanta, Kunwar Laxmi Mahat, Upadhayaya Kul S., Bhattarai Shandesh, Pyakurel Dipesh, Kutal Durga H., Pandey Pramod, Bhandari Ananta, Thapa Gokarna J., Zambrana Narel Y. Paniagua, Bussmann Rainer W.

(Refereed journal article or data article (A1))

Kymmenen vuotta ”toistettavuuskriisiä” (2022)

InFLAMES Flagship Blog

Heino Jyrki

(Popularised article or blog post (E1))

Transferring from moisture damaged school building to clean facilities - The avoidance of mold exposure induces a decline in symptoms and improvement in lung function among personnel (2022)

Environmental Research

Vilén Liisa, Päivinen Marja, Atosuo Janne, Putus Tuula

(Refereed journal article or data article (A1))