Sampo Pyysalo

LSD600: the first corpus of biomedical abstracts annotated with lifestyle–disease relations (2025)

Database: The Journal of Biological Databases and Curation

Nourani, Esmaeil; Makri, Evangelia-Mantelena; Mao, Xiqing; Pyysalo, Sampo; Brunak, Søren; Nastou, Katerina; Jensen, Lars Juhl

(A1 Vertaisarvioitu alkuperäisartikkeli tieteellisessä lehdessä )

An Expanded Massive Multilingual Dataset for High-Performance Language Technologies (HPLT) (2025)

Annual Meeting of the Association for Computational Linguistics

Burchell, Laurie; De Gibert Bonet, Ona; Arefyev, Nikolay; Aulamo, Mikko; Bañón, Marta; Chen, Pinzhen; Fedorova, Mariia; Guillou, Liane; Haddow, Barry; Hajič, Jan; Helcl, Jindřich; Henriksson, Erik; Klimaszewski, Mateusz; Komulainen, Ville; Kutuzov, Andrey; Kytöniemi, Joona; Laippala, Veronika; Mæhlum, Petter; Malik, Bhavitvya; Mehryary, Farrokh; Mikhailov, Vladislav; Moghe, Nikita; Myntti, Amanda; O’Brien, Dayyán; Oepen, Stephan; Pal, Proyag; Piha, Jousia; Pyysalo, Sampo; Ramírez-Sánchez, Gema; Samuel, David; Stepachev, Pavel; Tiedemann, Jörg; Variš, Dušan; Vojtěchová, Tereza; Zaragoza-Bernabeu, Jaume

(A4 Vertaisarvioitu artikkeli konferenssijulkaisussa)

Scaling Data-Constrained Language Models (2025)

Journal of Machine Learning Research

Muennighoff, Niklas; Rush, Alexander M.; Barak, Boaz; Le Scao, Teven; Piktus, Aleksandra; Tazi, Nouamane; Pyysalo, Sampo; Wolf, Thomas; Raffel, Colin

(A1 Vertaisarvioitu alkuperäisartikkeli tieteellisessä lehdessä )

Question Answering models for information extraction from perovskite materials science literature (2025)

Communications materials

Sipilä, Matilda; Mehryary, Farrokh; Pyysalo, Sampo; Ginter, Filip; Todorović, Milica

(A1 Vertaisarvioitu alkuperäisartikkeli tieteellisessä lehdessä )

Annotated textual dataset PV600 of perovskite bandgaps for information extraction from literature (2025)

Scientific Data

Sipilä, Matilda; Mehryary, Farrokh; Pyysalo, Sampo; Ginter, Filip; Todorovic, Milica

(A1 Vertaisarvioitu data-artikkeli tieteellisessä lehdessä)

STRING-ing together protein complexes: Corpus and methods for extracting physical protein interactions from the biomedical literature (2024)

Bioinformatics

Mehryary, Farrokh; Nastou, Katerina; Ohta, Tomoko; Jensen, Lars Juhl; Pyysalo, Sampo

(A1 Vertaisarvioitu alkuperäisartikkeli tieteellisessä lehdessä )

Improving dictionary-based named entity recognition with deep learning (2024)

Bioinformatics

Nastou, Katerina; Koutrouli, Mikaela; Pyysalo, Sampo; Jensen, Lars Jyhl

(A1 Vertaisarvioitu alkuperäisartikkeli tieteellisessä lehdessä )

Question Answering models for information extraction from perovskite materials science literature (2024)

MRS Fall Meeting and Exhibit

Sipilä, Matilda; Mehryary, Farrokh; Pyysalo, Sampo; Ginter, Filip, Todorović, Milica

(Abstrakti)

Building Question-Answer Data Using Web Register Identification (2024)

Language Resources and Evaluation, LREC Proceedings

Eskelinen Anni, Myntti Amanda, Henriksson Erik, Pyysalo Sampo, Laippala Veronika

(A4 Vertaisarvioitu artikkeli konferenssijulkaisussa)

The STRING database in 2025: protein networks with directionality of regulation (2024)

Nucleic Acids Research

Szklarczyk, Damian; Nastou, Katerina; Koutrouli, Mikaela; Kirsch, Rebecca; Mehryary, Farrokh; Hachilif, Radja; Hu, Dewei; Peluso, Matteo E.; Huang, Qingyao; Fang, Tao; Doncheva, Nadezhda T.; Pyysalo, Sampo; Bork, Peer; Jensen, Lars J.; von Mering, Christian

(A1 Vertaisarvioitu alkuperäisartikkeli tieteellisessä lehdessä )

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Pyysalo

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LSD600: the first corpus of biomedical abstracts annotated with lifestyle–disease relations (2025)

An Expanded Massive Multilingual Dataset for High-Performance Language Technologies (HPLT) (2025)

Scaling Data-Constrained Language Models (2025)

Question Answering models for information extraction from perovskite materials science literature (2025)

Annotated textual dataset PV600 of perovskite bandgaps for information extraction from literature (2025)

STRING-ing together protein complexes: Corpus and methods for extracting physical protein interactions from the biomedical literature (2024)

Improving dictionary-based named entity recognition with deep learning (2024)

Question Answering models for information extraction from perovskite materials science literature (2024)

Building Question-Answer Data Using Web Register Identification (2024)

The STRING database in 2025: protein networks with directionality of regulation (2024)